, including all inherited members.
| getRange(int side) const (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| isKnown_ (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| JunctionSideSection() (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| JunctionSideSection(JunctionStrand, const Location &) (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| JunctionSideSection(JunctionStrand, const Location &, int length) (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| JunctionSideSection(JunctionStrand, const Location &, JunctionSideSectionZygosity) (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| JunctionSideSection(JunctionStrand, const Location &, int length, JunctionSideSectionZygosity) (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| length_ (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| position_ (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| read(std::vector< std::string >::const_iterator &, const ReferenceGenome &) (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| strand_ (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| TOKEN_COUNT (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | [static] |
| write(std::ostream &, const ReferenceGenome &, const std::string &separator) const (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |
| zygosity_ (defined in cgatools::junctions::JunctionSideSection) | cgatools::junctions::JunctionSideSection | |