JunctionCompare.hpp File Reference

This file contains definitions of classes used to compare sets of junctions. More...

#include "cgatools/core.hpp"
#include "cgatools/junctions/Junction.hpp"
#include "cgatools/util/GenericHistogram.hpp"
#include <string>
#include <vector>
#include <map>

Go to the source code of this file.

Classes
class	cgatools::junctions::JunctionRef
	A utility class used as a lightweight reference to a junction record and might contain a list of references to associated junctions. More...
class	cgatools::junctions::CompareBySide
class	cgatools::junctions::JunctionRefs
class	cgatools::junctions::FullGenomeJunctionComparator
Namespaces
namespace	cgatools
	Namespace containing the libcgatools API.
namespace	cgatools::reference
	Namespace for reference-specific utilities.

---

Detailed Description

This file contains definitions of classes used to compare sets of junctions.