Call.hpp File Reference

#include "cgatools/core.hpp"
#include "cgatools/reference/CrrFile.hpp"
#include "cgatools/util/DelimitedFile.hpp"
#include <string>

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Classes
struct	cgatools::variants::Call
	A struct that corresponds to a single line of a Complete Genomics variant file. More...
class	cgatools::variants::Call::VarQualityField
class	cgatools::variants::Call::TotalScoreField
Namespaces
namespace	cgatools
	Namespace containing the libcgatools API.
namespace	cgatools::variants
	Namespace for variant file processing utilities.
Defines
#define	CGATOOLS_VARIANTS_CALL_HPP_   1
Functions
void	cgatools::variants::upgradeOldFieldValues (Call &c)
	Convert some field values that exist only in old variation files to their contemporary equivalents.
std::ostream &	cgatools::variants::operator<< (std::ostream &out, const Call::VarQuality &varQuality)

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Detailed Description