VariantFileVcfSource.hpp File Reference

#include "cgatools/core.hpp"
#include "cgatools/conv/VcfRecordSource.hpp"
#include "cgatools/reference/CrrFile.hpp"
#include "cgatools/variants/SuperlocusIterator.hpp"
#include <deque>
#include <map>
#include <set>
#include <vector>

Go to the source code of this file.

Classes
class	cgatools::variants::VariantFileVcfRecordWriter
struct	cgatools::variants::VariantFileVcfRecordWriter::VcfData
struct	cgatools::variants::VariantFileVcfRecordWriter::HaploEntry
class	cgatools::variants::VariantFileVcfRecordSource
class	cgatools::variants::VariantFileVcfRecordSource::OrderBySizeAscending
Namespaces
namespace	cgatools
	Namespace containing the libcgatools API.
namespace	cgatools::variants
	Namespace for variant file processing utilities.
Defines
#define	CGATOOLS_VARIANTS_VARIANTFILEVCFSOURCE_HPP_   1

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Detailed Description