cgatools::variants::Allele Member List

This is the complete list of members for cgatools::variants::Allele, including all inherited members.

addCallOffset(size_t offset)	cgatools::variants::Allele
Allele()	cgatools::variants::Allele	[inline]
Allele(const Locus *locus)	cgatools::variants::Allele	[inline]
clearCalls()	cgatools::variants::Allele
getAlleleFreqs() const	cgatools::variants::Allele
getAlleleSequence() const	cgatools::variants::Allele
getAlternativeCalls() const (defined in cgatools::variants::Allele)	cgatools::variants::Allele
getCall(size_t index) const (defined in cgatools::variants::Allele)	cgatools::variants::Allele
getCallOffsets() const	cgatools::variants::Allele	[inline]
getCombinedVarFilter() const	cgatools::variants::Allele
getHapLink() const	cgatools::variants::Allele
getMinVarScoreEAF() const	cgatools::variants::Allele
getMinVarScoreVAF() const	cgatools::variants::Allele
getRefSequence() const	cgatools::variants::Allele
getXRef() const	cgatools::variants::Allele
hasNoCalls() const	cgatools::variants::Allele
setLocus(const Locus *locus)	cgatools::variants::Allele