cgatools::cgdata::EvidenceReader::IntervalRecord Struct Reference

List of all members.

Public Member Functions
reference::Range	getRange () const
bool	isCompatible (uint16_t alleleIndex, const variants::Call &call, const reference::CrrFile &crr) const
std::string	getAlignment (size_t alleleIndex) const
Static Public Member Functions
static std::string	cigarToAlignment (const std::string &cigar)
Public Attributes
int32_t	intervalId_
uint16_t	chromosome_
uint32_t	offset_
uint32_t	length_
uint16_t	ploidy_
int32_t	score_
std::vector< uint16_t >	alleleIndexes_
boost::array< std::string, 3 >	alleles_
boost::array< std::string, 2 >	alleleAlignments_

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The documentation for this struct was generated from the following file:

• EvidenceReader.hpp