LibraryReader.hpp File Reference

#include "cgatools/core.hpp"
#include <boost/noncopyable.hpp>
#include <boost/filesystem.hpp>
#include <boost/regex.hpp>
#include <boost/array.hpp>

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Classes
class	cgatools::cgdata::GapTable< T >
	The class contains simple gap estimation table template. More...
class	cgatools::cgdata::GapTable< T >::GapsRecord
Namespaces
namespace	cgatools
	Namespace containing the libcgatools API.
Defines
#define	CGATOOLS_CGDATA_LIBRARY_READER_HPP_   1
Typedefs
typedef boost::array< int8_t, 3 >	cgatools::cgdata::SmallGapTuple
	The following types are used to parametrize simple gap estimation table.
typedef int	cgatools::cgdata::MateGapSize
typedef GapTable< SmallGapTuple >	cgatools::cgdata::WobbleGapTable
typedef GapTable< MateGapSize >	cgatools::cgdata::MateGapTable

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Detailed Description