, including all inherited members.
Command(const std::string &name, const std::string &shortDescription, const std::string &formatVersionSupported, const std::string &longDescription) (defined in cgatools::command::Command) | cgatools::command::Command | [protected] |
Crr2Fasta(const std::string &name) (defined in cgatools::command::Crr2Fasta) | cgatools::command::Crr2Fasta | |
formatDescription(const std::string &description, size_t indent, size_t maxLineLength, bool html) | cgatools::command::Command | [static] |
getCommandLine() const (defined in cgatools::command::Command) | cgatools::command::Command | |
getHelpLineLength() (defined in cgatools::command::Command) | cgatools::command::Command | [static] |
getName() const | cgatools::command::Command | [inline] |
getShortDescription() const | cgatools::command::Command | [inline] |
help(std::ostream &out, bool html) | cgatools::command::Command | |
hiddenOptions_ (defined in cgatools::command::Command) | cgatools::command::Command | [protected] |
openStdin(const std::string &path) | cgatools::command::Command | [protected] |
openStdout(const std::string &path) | cgatools::command::Command | [protected] |
operator()(int argc, char **argv) | cgatools::command::Command | |
options_ (defined in cgatools::command::Command) | cgatools::command::Command | [protected] |
pipelineVersion_ (defined in cgatools::command::Command) | cgatools::command::Command | [protected] |
positionalOptions_ (defined in cgatools::command::Command) | cgatools::command::Command | [protected] |
requireParam(const po::variables_map &vm, const std::string ¶m) | cgatools::command::Command | [protected] |
run(po::variables_map &vm) | cgatools::command::Crr2Fasta | [protected, virtual] |
~Command() | cgatools::command::Command | [inline, protected, virtual] |