, including all inherited members.
| Command(const std::string &name, const std::string &shortDescription, const std::string &formatVersionSupported, const std::string &longDescription) (defined in cgatools::command::Command) | cgatools::command::Command | [protected] |
| formatDescription(const std::string &description, size_t indent, size_t maxLineLength, bool html) | cgatools::command::Command | [static] |
| getCommandLine() const (defined in cgatools::command::Command) | cgatools::command::Command | |
| getHelpLineLength() (defined in cgatools::command::Command) | cgatools::command::Command | [static] |
| getName() const | cgatools::command::Command | [inline] |
| getShortDescription() const | cgatools::command::Command | [inline] |
| help(std::ostream &out, bool html) | cgatools::command::Command | |
| hiddenOptions_ (defined in cgatools::command::Command) | cgatools::command::Command | [protected] |
| JunctionDiff(const std::string &name) (defined in cgatools::command::JunctionDiff) | cgatools::command::JunctionDiff | |
| openStdin(const std::string &path) | cgatools::command::Command | [protected] |
| openStdout(const std::string &path) | cgatools::command::Command | [protected] |
| operator()(int argc, char **argv) | cgatools::command::Command | |
| options_ (defined in cgatools::command::Command) | cgatools::command::Command | [protected] |
| pipelineVersion_ (defined in cgatools::command::Command) | cgatools::command::Command | [protected] |
| positionalOptions_ (defined in cgatools::command::Command) | cgatools::command::Command | [protected] |
| requireParam(const po::variables_map &vm, const std::string ¶m) | cgatools::command::Command | [protected] |
| run(po::variables_map &vm) | cgatools::command::JunctionDiff | [protected, virtual] |
| ~Command() | cgatools::command::Command | [inline, protected, virtual] |
1.6.2
