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cgatools::mapping::EvidenceCacheDnbRecord Member List
This is the complete list of members for
cgatools::mapping::EvidenceCacheDnbRecord
, including all inherited members.
alleleAlignment_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
alleleConcordance_
(defined in
cgatools::mapping::EvidenceCacheDnbRecord
)
cgatools::mapping::EvidenceCacheDnbRecord
alleleIndex_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
bindToParser
(util::DelimitedFile &parser, DnbRecord &rec, const reference::CrrFile &crr) (defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
[static]
chromosome_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
dnbOffsetInLaneFile_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
DnbRecord
() (defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
fileNumInLane_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
getId
() const (defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
intervalId_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
lane_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
mappingQuality_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
offsetInAllele_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
offsetInReference_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
operator<<
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
[friend]
referenceAlignment_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
scoreAllele_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
scores_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
sequence_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
side_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
slide_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
strand_
(defined in
cgatools::cgdata::EvidenceReader::DnbRecord
)
cgatools::cgdata::EvidenceReader::DnbRecord
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