CrrFile() (defined in cgatools::reference::CrrFile) | cgatools::reference::CrrFile | |
CrrFile(const std::string &path) (defined in cgatools::reference::CrrFile) | cgatools::reference::CrrFile | |
currentVersion() | cgatools::reference::CrrFile | [static] |
getBase(const Location &loc) const | cgatools::reference::CrrFile | |
getChromosomeId(const std::string &chromosomeName) const | cgatools::reference::CrrFile | |
getLocation(const std::string &chromosomeName, boost::uint32_t offset) const | cgatools::reference::CrrFile | [inline] |
getSequence(const Range &range) const | cgatools::reference::CrrFile | |
listChromosomes() const | cgatools::reference::CrrFile | |
listContigs(uint32_t minGapLength=50) const | cgatools::reference::CrrFile | |
open(const std::string &path) (defined in cgatools::reference::CrrFile) | cgatools::reference::CrrFile | |
validate() const | cgatools::reference::CrrFile |