cgatools::variants::VariantFileIterator Member List

This is the complete list of members for cgatools::variants::VariantFileIterator, including all inherited members.

close() (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator
eof() const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator	[inline]
error(const std::string &msg) const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator
fillOlplFileMetadata(util::DelimitedFile::Metadata &meta) const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator
getAnnotationColumnHeaders() const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator	[inline]
getAnnotationIndex(const std::string &name) const	cgatools::variants::VariantFileIterator
getColumnHeaders() const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator	[inline]
getFileName() (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator	[inline]
getMetadata() const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator	[inline]
locusCallError(const std::string &msg, const Locus &locus, const Call &call) const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator
locusError(const std::string &msg, const Locus &locus) const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator
open(const std::string &fn) (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator
operator*() const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator	[inline]
operator++() (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator	[inline]
operator->() const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator	[inline]
setReferenceCoverValidation(bool validate) (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator	[inline]
VariantFileIterator(const CrrFile &crr) (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator
writeOlplFileHeader(std::ostream &out) const (defined in cgatools::variants::VariantFileIterator)	cgatools::variants::VariantFileIterator