cgatools::cgdata::EvidenceReader::IntervalRecord Member List

This is the complete list of members for cgatools::cgdata::EvidenceReader::IntervalRecord, including all inherited members.

alleleAlignments_ (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
alleleIndexes_ (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
alleles_ (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
bindToParser(util::DelimitedFile &parser, IntervalRecord &rec, const reference::CrrFile &crr) (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord	[static]
chromosome_ (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
cigarToAlignment(const std::string &cigar) (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord	[static]
getAlignment(size_t alleleIndex) const (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
getRange() const (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
intervalId_ (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
IntervalRecord() (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
isCompatible(uint16_t alleleIndex, const variants::Call &call, const reference::CrrFile &crr) const	cgatools::cgdata::EvidenceReader::IntervalRecord
isCompatible(uint16_t alleleIndex, const reference::Range &range, const std::string &seq, bool ignoreAdjacentInsertions) const	cgatools::cgdata::EvidenceReader::IntervalRecord
length_ (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
offset_ (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
ploidy_ (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord
score_ (defined in cgatools::cgdata::EvidenceReader::IntervalRecord)	cgatools::cgdata::EvidenceReader::IntervalRecord