cgatools::variants::Call Member List

This is the complete list of members for cgatools::variants::Call, including all inherited members.
addFieldParsers(util::DelimitedFile &df, const reference::CrrFile &crr)cgatools::variants::Call
ALL_HAPLOTYPEScgatools::variants::Call [static]
alleleSeq_cgatools::variants::Call
Call()cgatools::variants::Call
calledSequence(const reference::CrrFile &crr) const cgatools::variants::Call
getHeader(const char separator= '\t')cgatools::variants::Call [static]
hapLink_cgatools::variants::Call
haplotype_cgatools::variants::Call
hasNoCalls() const cgatools::variants::Call
isRefConsistent(const reference::CrrFile &crr) const cgatools::variants::Call
locus_cgatools::variants::Call
ploidy_cgatools::variants::Call
range_cgatools::variants::Call
reference_cgatools::variants::Call
refSequence(const reference::CrrFile &crr) const cgatools::variants::Call
totalScore_cgatools::variants::Call
UNKNOWN_PLOIDYcgatools::variants::Call [static]
varType_cgatools::variants::Call
write(std::ostream &out, const reference::CrrFile &crr, const char sep= '\t') const cgatools::variants::Call
xRef_cgatools::variants::Call
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