cgatools::mapping::GapEst::TemplateSequenceRetriever< TSequence > Member List

This is the complete list of members for cgatools::mapping::GapEst::TemplateSequenceRetriever< TSequence >, including all inherited members.

getSequence(Sequence &seq, int cloneEndOffset, int sequenceLength) const	cgatools::mapping::GapEst::TemplateSequenceRetriever< TSequence >	[inline, virtual]
Sequence typedef (defined in cgatools::mapping::GapEst::SequenceRetriever)	cgatools::mapping::GapEst::SequenceRetriever
TemplateSequenceRetriever(const TSequence &sequence, bool isCircular, boost::uint32_t cloneEnd, int side, int strand) (defined in cgatools::mapping::GapEst::TemplateSequenceRetriever< TSequence >)	cgatools::mapping::GapEst::TemplateSequenceRetriever< TSequence >	[inline]
WOBBLE_SEQUENCE_BASE_COUNT (defined in cgatools::mapping::GapEst::SequenceRetriever)	cgatools::mapping::GapEst::SequenceRetriever	[static]
~SequenceRetriever() (defined in cgatools::mapping::GapEst::SequenceRetriever)	cgatools::mapping::GapEst::SequenceRetriever	[inline, virtual]