cgatools::mapping::InLaneBatchStreams Class Reference

Inheritance diagram for cgatools::mapping::InLaneBatchStreams:

List of all members.

Public Types
typedef std::vector < boost::filesystem::path >	InputBatchFiles
typedef boost::ptr_map < std::string, InputBatchFiles >	InputLaneBatches
Public Member Functions
	InLaneBatchStreams (const boost::filesystem::path &inputRoot)
void	collectFiles ()
	collects the files found in or below inputRoot and splits each batch into a separate bucket
const InputBatchFiles &	getBatchFiles (const std::string &slide, const std::string &lane, size_t batchNo) const
Protected Attributes
boost::filesystem::path	inputRoot_
InputLaneBatches	inputBatches_
InputBatchFiles	emptyBatch_

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The documentation for this class was generated from the following file:

• LaneBatchCache.hpp