cgatools::mapping::SamFileHeader Class Reference

List of all members.

Classes
class	Record
Public Types
typedef std::vector< Record >	Records
typedef std::map< std::string, Records >	RecordMap
typedef std::map< std::string, const Record * >	HeaderRecordIndex
Public Member Functions
bool	hasRecords (const std::string &section) const
const Records &	getRecords (const std::string &section) const
Records &	getRecords (const std::string &section)
void	addLine (const std::string &headerLine)
bool	hasReadGroup (const std::string &rgId) const
const Record &	getReadGroup (const std::string &rgId) const
void	initMetadata ()
Public Attributes
RecordMap	recordMap_
Protected Attributes
Record	samHeaderRecord_
util::DelimitedLineParser	dl_
HeaderRecordIndex	readGroups_

---

The documentation for this class was generated from the following file:

• SamReader.hpp