CallDiffMatchType.hpp File Reference

#include "cgatools/core.hpp"

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Namespaces

namespace  cgatools
 

Namespace containing the libcgatools API.


namespace  cgatools::variants
 

Namespace for variant file processing utilities.


Defines

#define CGATOOLS_VARIANTS_CALLDIFFMATCHTYPE_HPP_   1

Enumerations

enum  MatchType {
  cgatools::variants::cdmt::REF_IDENTICAL = 0, cgatools::variants::cdmt::ALT_IDENTICAL = 1, cgatools::variants::cdmt::REF_CONSISTENT = 2, cgatools::variants::cdmt::ALT_CONSISTENT = 3,
  cgatools::variants::cdmt::ONLY_A = 4, cgatools::variants::cdmt::ONLY_B = 5, cgatools::variants::cdmt::MISMATCH = 6, cgatools::variants::cdmt::PHASE_MISMATCH = 7,
  cgatools::variants::cdmt::PLOIDY_MISMATCH = 8, MATCH_TYPE_LAST = 9
}
 

Enumeration describing the type of match found one one allele.

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