CallDiffMatchType.hpp
Go to the documentation of this file.00001 // Copyright 2010 Complete Genomics, Inc. 00002 // 00003 // Licensed under the Apache License, Version 2.0 (the "License"); you 00004 // may not use this file except in compliance with the License. You 00005 // may obtain a copy of the License at 00006 // 00007 // http://www.apache.org/licenses/LICENSE-2.0 00008 // 00009 // Unless required by applicable law or agreed to in writing, software 00010 // distributed under the License is distributed on an "AS IS" BASIS, 00011 // WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or 00012 // implied. See the License for the specific language governing 00013 // permissions and limitations under the License. 00014 00015 #ifndef CGATOOLS_VARIANTS_CALLDIFFMATCHTYPE_HPP_ 00016 #define CGATOOLS_VARIANTS_CALLDIFFMATCHTYPE_HPP_ 1 00017 00019 00020 #include "cgatools/core.hpp" 00021 00022 namespace cgatools { namespace variants { namespace cdmt { 00023 00026 enum MatchType 00027 { 00028 REF_IDENTICAL = 0, 00029 ALT_IDENTICAL = 1, 00030 REF_CONSISTENT = 2, 00031 ALT_CONSISTENT = 3, 00032 ONLY_A = 4, 00033 ONLY_B = 5, 00034 MISMATCH = 6, 00035 PHASE_MISMATCH = 7, 00036 PLOIDY_MISMATCH = 8, 00037 MATCH_TYPE_LAST = 9 00038 }; 00039 00040 } } } // cgatools::variants::cdmt 00041 00042 #endif // CGATOOLS_VARIANTS_CALLDIFFMATCHTYPE_HPP_
