cgatools::junctions::JuctionStatisticsCollector Member List

This is the complete list of members for cgatools::junctions::JuctionStatisticsCollector, including all inherited members.

clusterSizeInBases_ (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector	[protected]
clusterSizeInJunctions_ (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector	[protected]
counters_ (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector	[protected]
distanceTolerance_ (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector	[protected]
findNeighbours(const Junctions &junctions, int sideToCompare=JUNCTION_BOTH_SIDES) (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector
findOneSideNeighbours(const Junctions &junctions, int firstSide) (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector
JuctionStatisticsCollector(uint32_t distanceTolerance) (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector	[inline]
oneSideNeighbourDist_ (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector	[protected]
out_ (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector	[protected]
run(const Junctions &junctions, std::ostream &out) (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector
scoreHistogram_ (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector	[protected]
searchDistanceTolerance_ (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector	[protected]
twoSideNeighbourDist_ (defined in cgatools::junctions::JuctionStatisticsCollector)	cgatools::junctions::JuctionStatisticsCollector	[protected]