cgatools::mapping::Map2SamConfig Class Reference

Inheritance diagram for cgatools::mapping::Map2SamConfig:

List of all members.

Public Attributes
size_t	recordsFrom_
size_t	recordsTo_
bool	skipNotMapped_
bool	addMateSequenceAndScore_
bool	addUnmappedMateInfo_
bool	mateSvCandidates_
bool	dumpDebugInfo_
util::StringVector	exportRegions_
std::string	exportRootDirName_
std::string	inputReadsBatchId_
std::string	inputReadsFileName_
std::string	inputMappingsFileName_
std::string	referenceFileName_
std::string	outputFileName_
std::string	commandLine_

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The documentation for this class was generated from the following file:

• Map2SamConverter.hpp