cgatools::mapping::SamStatistics Class Reference

List of all members.

Public Types
enum	{   IND_SINGLE_BEST_MATES = 0, IND_MULTIPLE_BEST_MATES, IND_ONLY_ZERO_WEIGHT_BEST_MATES, IND_ONE_ARM_BEST_MAPPINGS_NO_MATES,   IND_ONE_ARM_ONLY_MAPPED_HAS_BEST, IND_ONE_ARM_ONLY_MAPPED, IND_READ_NOT_MAPPED, IND_PAIRED_SINGLE_ARM_MAPPINGS,   IND_EVIDENCE_MAPPINGS_FOUND, IND_EVIDENCE_MAPPINGS_LOADED, IND_DUPLICATE_MAPPINGS_FILTERED, IND_TOTAL_VALUES }
typedef boost::array< size_t, IND_TOTAL_VALUES >	SamStatCounters
Public Attributes
SamStatCounters	counters_
Friends
std::ostream &	operator<< (std::ostream &out, const SamStatistics &r)

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The documentation for this class was generated from the following file:

• Map2SamConverter.hpp