cgatools::command::JunctionDiffConfig Class Reference

List of all members.

Public Attributes
bool	calcFileStat_
std::string	referenceFileName_
std::string	outPrefix_
std::vector< std::string >	junctionFiles_
std::vector< size_t >	scoreThresholds_
uint32_t	distanceTolerance_
uint32_t	minJunctionLength_
bool	outputVcf_
size_t	vcfFilterScoreThreshold_
size_t	vcfFilterSideLength_
bool	vcfNormalPriorityOutput_

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The documentation for this class was generated from the following file:

• JunctionDiff.hpp