cgatools::mapping::EvidenceCacheReader Class Reference

List of all members.

Public Types

typedef std::vector
< boost::filesystem::path > 
InputBatchFiles
typedef boost::ptr_map
< uint64_t, InputBatchFiles > 
InputLaneBatches

Public Member Functions

 EvidenceCacheReader (const boost::filesystem::path &rootDir)
void readBatchRecords (const std::string &slide, const std::string &lane, size_t batchNo, BatchRecords &result, const reference::CrrFile &crr)

Static Protected Member Functions

static void initCacheRecordParser (util::DelimitedFile &delimitedFile, EvidenceCacheDnbRecord &record, const reference::CrrFile &crr)

Protected Attributes

InLaneBatchStreams inputBatches_

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