cgatools::mapping::SamFileParser Class Reference

List of all members.

Public Member Functions
	SamFileParser (std::istream &in, const std::string &fileName)
bool	next ()
const SamFileRecord &	getRecord () const
void	initMetadata ()
Public Attributes
SamFileHeader	header_
Protected Attributes
bool	isInitialised_
std::istream &	in_
std::string	fileName_
std::string	line_
size_t	lineNo_
SamFileRecord	samFileRecord_
util::DelimitedLineParser	dl_

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The documentation for this class was generated from the following file:

• SamReader.hpp